BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C10SP1|AL427295
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1222 1691 0.0
>3x_Contig1222
Length = 5224
Score = 1691 bits (846), Expect = 0.0
Identities = 878/893 (98%), Gaps = 1/893 (0%)
Strand = Plus / Plus
Query: 1 gatccctttcagtgttactattgtractgacgagagtkaaatggtcgcatggtggtaata 60
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 2957 gatccctttcagtgttactattgtaactgacgagagttaaatggtcgcatggtggtaata 3016
Query: 61 caactctctttcctggtggcacttggaatttttcaatcgttttaagcaggggacagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3017 caactctctttcctggtggcacttggaatttttcaatcgttttaagcaggggacagtatt 3076
Query: 121 gtagatcatcgactattgtrgtgttatcctcacattgcaattgattcactgtcataatcc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3077 gtagatcatcgactattgtagtgttatcctcacattgcaattgattcactgtcataatcc 3136
Query: 181 taggtgcaatcactttcttaccccttcttatgttcaaagtgaacagcgtttccacgtcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3137 taggtgcaatcactttcttaccccttcttatgttcaaagtgaacagcgtttccacgtcat 3196
Query: 241 gtaaatnagtrgtctcaaatatcgtgtcgatatcaaacatgtcaacttcctggtgattaa 300
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3197 gtaaataagtagtctcaaatatcgtgtcgatatcaaacatgtcaacttcctggtgattaa 3256
Query: 301 tatctcggttggcgaatatatgtbattcacataatcgtagttggctttgacaatggctta 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3257 tatctcggttggcgaatatatgtaattcacataatcgtagttggctttgacaatggctta 3316
Query: 361 gctctctgaratagaacttggaaaggaaattggtagtcgtcttatacatgavgcatagat 420
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3317 gctctctgaaatagaacttggaaaggaaattggtagtcgtcttatacatgaagcatagat 3376
Query: 421 tctttagagtmcccatcccacttagccctctacttaattcacataatgccgtcgccaatg 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3377 tctttagagtacccatcccacttagccctctacttaattcacataatgccgtcgccaatg 3436
Query: 481 ggtcactgtagcagcgatcggatacgatgacaatgagaacgttgtcaaacttccgtagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3437 ggtcactgtagcagcgatcggatacgatgacaatgagaacgttgtcaaacttccgtagaa 3496
Query: 541 attcgctcaacacaggaaacttgaacgtatctgtctttdcgccagcggtgtttctctcat 600
|||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 3497 attcgctcaacacaggaaacttgaacgtatctgtatttacgcaagcggtgtttctctcat 3556
Query: 601 cagataacaactcataattgccaggstctgctaaggtttttgatgattccctatccaaat 660
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 3557 cagataacaactcataattgcaaggatctgctaaggtttttgatgattccctatccaaat 3616
Query: 661 cccaaatcttcaatacaccaagcttgcgctttataattgttctaaaatgtgaaccaacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3617 cccaaatcttcaatacaccaagcttgcgctttataattgttctaaaatgtgaaccaacct 3676
Query: 721 tactccatgctaacagactctctagactgtctagtccgctagttactacacgatcaataa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3677 tactccatgctaacagactctctagactgtctagtccgctagttactacacgatcaataa 3736
Query: 781 tttcgatcggaagactcattacttttgtacccttaaatcttcttctcctccttcttatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3737 tttcgatcggaagactcattacttttgtacccttaaatcttcttctcctccttcttatca 3796
Query: 841 ttagcaaatctgtcaaaagtgtc-actaatgcagcttatcttgcacgttgtaa 892
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3797 ttagcaaatctgtcaaaagtgtcaactaatgcagcttatcttgcacgttgtaa 3849
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5111
Number of Sequences: 1807
Number of extensions: 5111
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)